Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FAM90A23P-201ENST00000400136 1395 ntBASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 PCDHA6-201ENST00000378126 3267 ntBASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00346Q8IVM7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 RCC2P1-201ENST00000452257 1476 ntBASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 AC099521.3-201ENST00000624251 2938 ntBASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 AC103592.1-201ENST00000394513 664 ntBASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 XBP1P1-201ENST00000436573 652 ntBASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 AC005324.6-201ENST00000587972 613 ntBASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 MARK2P9-201ENST00000430958 1727 ntBASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00346Q8IVM7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00346Q8IVM7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LINC00346Q8IVM7 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC00346Q8IVM7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00346Q8IVM7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00346Q8IVM7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00346Q8IVM7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00346Q8IVM7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 COL6A4P2-202ENST00000504443 2753 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 MIR663B-201ENST00000408361 115 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 HLA-J-204ENST00000495278 958 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 FAM86HP-204ENST00000513466 959 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 AL023803.2-201ENST00000620080 638 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 AC019294.4-201ENST00000561777 2905 ntBASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00346Q8IVM7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms