Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 AC138761.6-201ENST00000583997 1423 ntBASIC15.68■□□□□ 0.1
TRIM50Q86XT4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 AC015909.5-201ENST00000624336 2266 ntBASIC15.68■□□□□ 0.1
TRIM50Q86XT4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 RN7SL767P-201ENST00000493013 295 ntBASIC15.68■□□□□ 0.1
TRIM50Q86XT4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 AL132994.1-201ENST00000554098 400 ntBASIC15.68■□□□□ 0.1
TRIM50Q86XT4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 AC006158.1-201ENST00000610661 249 ntBASIC15.68■□□□□ 0.1
TRIM50Q86XT4 AC138466.5-201ENST00000624002 808 ntBASIC15.68■□□□□ 0.1
TRIM50Q86XT4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 AL590824.1-201ENST00000403828 1349 ntBASIC15.68■□□□□ 0.1
TRIM50Q86XT4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM50Q86XT4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 AL139158.3-201ENST00000641212 1562 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 KRT18P66-201ENST00000452970 1269 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 STK24P1-201ENST00000455035 1291 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 AC093909.3-201ENST00000504783 336 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 ALG1L6P-201ENST00000515248 758 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 RN7SKP155-201ENST00000516031 288 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM50Q86XT4 SNORD3B-1-201ENST00000577988 758 ntBASIC15.67■□□□□ 0.1
TRIM50Q86XT4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms