Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC004241.5-201ENST00000623870 2448 ntBASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 FAM90A12P-201ENST00000519497 2375 ntBASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 FAM90A24P-201ENST00000520792 2369 ntBASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 AC020910.6-201ENST00000623084 1459 ntBASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFWD3Q6PCD5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 AC007326.2-201ENST00000624224 7579 ntBASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 AP000358.1-201ENST00000456260 156 ntBASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 LINC01815-202ENST00000641468 1409 ntBASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RFWD3Q6PCD5 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 AC023794.5-201ENST00000564380 2157 ntBASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 AL627231.1-201ENST00000394467 1125 ntBASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 PRKXP1-201ENST00000561423 1122 ntBASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms