Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.73□□□□□ -0.37
CDK5Q00535 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CDK5Q00535 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.73□□□□□ -0.37
CDK5Q00535 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.73□□□□□ -0.37
CDK5Q00535 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 CRB3P1-201ENST00000449338 276 ntBASIC12.73□□□□□ -0.37
CDK5Q00535 TERF1P3-201ENST00000505638 1227 ntBASIC12.73□□□□□ -0.37
CDK5Q00535 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.73□□□□□ -0.37
CDK5Q00535 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.73□□□□□ -0.37
CDK5Q00535 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.73□□□□□ -0.37
CDK5Q00535 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CDK5Q00535 AC005962.1-201ENST00000584100 773 ntBASIC12.73□□□□□ -0.37
CDK5Q00535 AL161773.1-201ENST00000624845 863 ntBASIC12.73□□□□□ -0.37
CDK5Q00535 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.73□□□□□ -0.37
CDK5Q00535 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CDK5Q00535 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CDK5Q00535 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CDK5Q00535 CES1P1-201ENST00000421606 1704 ntBASIC12.73□□□□□ -0.37
CDK5Q00535 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CDK5Q00535 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CDK5Q00535 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.73□□□□□ -0.37
CDK5Q00535 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CDK5Q00535 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.72□□□□□ -0.37
CDK5Q00535 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.72□□□□□ -0.37
CDK5Q00535 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.72□□□□□ -0.37
CDK5Q00535 POM121L10P-201ENST00000436994 1285 ntBASIC12.72□□□□□ -0.37
CDK5Q00535 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.72□□□□□ -0.37
CDK5Q00535 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 AP006547.1-201ENST00000563435 692 ntBASIC12.72□□□□□ -0.37
CDK5Q00535 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.72□□□□□ -0.37
CDK5Q00535 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CDK5Q00535 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CDK5Q00535 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CDK5Q00535 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CDK5Q00535 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
CDK5Q00535 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.71□□□□□ -0.37
CDK5Q00535 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CDK5Q00535 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.71□□□□□ -0.37
CDK5Q00535 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CDK5Q00535 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 AC004899.2-201ENST00000622993 3860 ntBASIC12.71□□□□□ -0.37
CDK5Q00535 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDK5Q00535 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms