Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 AC092299.1-201ENST00000632679 757 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 AL358472.5-202ENST00000641448 1267 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 AF013593.1-201ENST00000458074 1487 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB1P98172 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.56□□□□□ -0.4
EFNB1P98172 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.56□□□□□ -0.4
EFNB1P98172 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
EFNB1P98172 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
EFNB1P98172 FAM90A7P-201ENST00000382628 1395 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 FAM90A23P-201ENST00000400136 1395 ntBASIC12.56□□□□□ -0.4
EFNB1P98172 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB1P98172 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 AL031432.4-201ENST00000641729 2190 ntBASIC12.55□□□□□ -0.4
EFNB1P98172 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.55□□□□□ -0.4
EFNB1P98172 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB1P98172 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB1P98172 SCARNA21-201ENST00000517026 139 ntBASIC12.55□□□□□ -0.4
EFNB1P98172 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.55□□□□□ -0.4
EFNB1P98172 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.55□□□□□ -0.4
EFNB1P98172 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.55□□□□□ -0.4
EFNB1P98172 AC244157.2-201ENST00000616239 1006 ntBASIC12.55□□□□□ -0.4
EFNB1P98172 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
EFNB1P98172 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB1P98172 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
EFNB1P98172 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.55□□□□□ -0.4
EFNB1P98172 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.55□□□□□ -0.4
EFNB1P98172 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
EFNB1P98172 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
EFNB1P98172 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.54□□□□□ -0.4
EFNB1P98172 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.54□□□□□ -0.4
EFNB1P98172 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
EFNB1P98172 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms