Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.31□□□□□ -0.44
UBA52P62987 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.31□□□□□ -0.44
UBA52P62987 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
UBA52P62987 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.31□□□□□ -0.44
UBA52P62987 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBA52P62987 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UBA52P62987 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UBA52P62987 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 RNU1-114P-201ENST00000365297 166 ntBASIC12.3□□□□□ -0.44
UBA52P62987 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.3□□□□□ -0.44
UBA52P62987 KLF2P2-201ENST00000416807 1039 ntBASIC12.3□□□□□ -0.44
UBA52P62987 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.3□□□□□ -0.44
UBA52P62987 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.3□□□□□ -0.44
UBA52P62987 FNTAP2-201ENST00000430308 634 ntBASIC12.3□□□□□ -0.44
UBA52P62987 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.3□□□□□ -0.44
UBA52P62987 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.3□□□□□ -0.44
UBA52P62987 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UBA52P62987 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.3□□□□□ -0.44
UBA52P62987 RN7SL48P-201ENST00000579283 293 ntBASIC12.3□□□□□ -0.44
UBA52P62987 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.3□□□□□ -0.44
UBA52P62987 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.3□□□□□ -0.44
UBA52P62987 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.3□□□□□ -0.44
UBA52P62987 AL096828.3-201ENST00000615354 462 ntBASIC12.3□□□□□ -0.44
UBA52P62987 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 NCLP1-201ENST00000445357 1963 ntBASIC12.3□□□□□ -0.44
UBA52P62987 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.3□□□□□ -0.44
UBA52P62987 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBA52P62987 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.3□□□□□ -0.44
UBA52P62987 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.29□□□□□ -0.44
UBA52P62987 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UBA52P62987 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms