Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 ACE3P-201ENST00000423435 1973 ntBASIC12.77□□□□□ -0.37
CASP6P55212 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.77□□□□□ -0.37
CASP6P55212 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 ST20-AS1-201ENST00000560255 4223 ntBASIC12.77□□□□□ -0.37
CASP6P55212 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.77□□□□□ -0.37
CASP6P55212 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 AC021305.1-201ENST00000520656 1514 ntBASIC12.77□□□□□ -0.37
CASP6P55212 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CASP6P55212 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CASP6P55212 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CASP6P55212 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CASP6P55212 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 AGGF1P1-201ENST00000509500 2073 ntBASIC12.76□□□□□ -0.37
CASP6P55212 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.76□□□□□ -0.37
CASP6P55212 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.76□□□□□ -0.37
CASP6P55212 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.76□□□□□ -0.37
CASP6P55212 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 AL139008.1-201ENST00000437894 228 ntBASIC12.76□□□□□ -0.37
CASP6P55212 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.76□□□□□ -0.37
CASP6P55212 GNG10P1-201ENST00000452289 199 ntBASIC12.76□□□□□ -0.37
CASP6P55212 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 RNA5SP406-201ENST00000516106 112 ntBASIC12.76□□□□□ -0.37
CASP6P55212 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 AC226150.1-201ENST00000544259 466 ntBASIC12.76□□□□□ -0.37
CASP6P55212 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC12.76□□□□□ -0.37
CASP6P55212 AL133467.4-201ENST00000602953 725 ntBASIC12.76□□□□□ -0.37
CASP6P55212 AC011247.3-201ENST00000603297 438 ntBASIC12.76□□□□□ -0.37
CASP6P55212 AL359091.4-201ENST00000610052 409 ntBASIC12.76□□□□□ -0.37
CASP6P55212 AC011471.3-201ENST00000623576 402 ntBASIC12.76□□□□□ -0.37
CASP6P55212 AL451007.2-201ENST00000632004 563 ntBASIC12.76□□□□□ -0.37
CASP6P55212 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 AC022532.1-201ENST00000624563 1728 ntBASIC12.76□□□□□ -0.37
CASP6P55212 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.76□□□□□ -0.37
CASP6P55212 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CASP6P55212 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.76□□□□□ -0.37
CASP6P55212 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CASP6P55212 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CASP6P55212 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CASP6P55212 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CASP6P55212 BRD7P5-201ENST00000299197 1822 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms