Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
APOC4P55056 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.35□□□□□ -0.75
APOC4P55056 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 AC020910.6-201ENST00000623084 1459 ntBASIC10.35□□□□□ -0.75
APOC4P55056 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.35□□□□□ -0.75
APOC4P55056 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.35□□□□□ -0.75
APOC4P55056 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
APOC4P55056 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 AP001267.2-201ENST00000532619 2086 ntBASIC10.34□□□□□ -0.75
APOC4P55056 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC10.34□□□□□ -0.75
APOC4P55056 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 RN7SKP109-201ENST00000410592 316 ntBASIC10.34□□□□□ -0.75
APOC4P55056 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC10.34□□□□□ -0.75
APOC4P55056 AL354861.1-201ENST00000445213 355 ntBASIC10.34□□□□□ -0.75
APOC4P55056 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC10.34□□□□□ -0.75
APOC4P55056 NDUFS6P1-201ENST00000485187 316 ntBASIC10.34□□□□□ -0.75
APOC4P55056 COQ10BP2-201ENST00000513804 724 ntBASIC10.34□□□□□ -0.75
APOC4P55056 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 IQSEC3P1-201ENST00000538799 536 ntBASIC10.34□□□□□ -0.75
APOC4P55056 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC10.34□□□□□ -0.75
APOC4P55056 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC10.34□□□□□ -0.75
APOC4P55056 AC135983.4-201ENST00000564116 1262 ntBASIC10.34□□□□□ -0.75
APOC4P55056 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC10.34□□□□□ -0.75
APOC4P55056 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 MIR3147-201ENST00000577811 66 ntBASIC10.34□□□□□ -0.75
APOC4P55056 MIR4722-201ENST00000578292 60 ntBASIC10.34□□□□□ -0.75
APOC4P55056 GAS7-216ENST00000583882 553 ntTSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC10.34□□□□□ -0.75
APOC4P55056 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC10.34□□□□□ -0.75
APOC4P55056 AC138894.2-201ENST00000602838 371 ntBASIC10.34□□□□□ -0.75
APOC4P55056 AC011491.1-203ENST00000637688 543 ntBASIC10.34□□□□□ -0.75
APOC4P55056 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.34□□□□□ -0.75
APOC4P55056 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
APOC4P55056 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.34□□□□□ -0.75
APOC4P55056 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms