Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.49■□□□□ 0.23
NEDD4P46934 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NEDD4P46934 PES1P2-201ENST00000449745 1735 ntBASIC16.49■□□□□ 0.23
NEDD4P46934 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NEDD4P46934 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NEDD4P46934 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 PPT1-213ENST00000641319 2388 ntBASIC16.48■□□□□ 0.23
NEDD4P46934 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.48■□□□□ 0.23
NEDD4P46934 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 AC092506.1-202ENST00000401022 528 ntBASIC16.48■□□□□ 0.23
NEDD4P46934 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.48■□□□□ 0.23
NEDD4P46934 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.48■□□□□ 0.23
NEDD4P46934 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.48■□□□□ 0.23
NEDD4P46934 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.48■□□□□ 0.23
NEDD4P46934 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
NEDD4P46934 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.48■□□□□ 0.23
NEDD4P46934 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.48■□□□□ 0.23
NEDD4P46934 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.48■□□□□ 0.23
NEDD4P46934 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 RPL17P45-201ENST00000586289 509 ntBASIC16.48■□□□□ 0.23
NEDD4P46934 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 AC128714.1-201ENST00000637035 887 ntBASIC16.48■□□□□ 0.23
NEDD4P46934 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.48■□□□□ 0.23
NEDD4P46934 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.48■□□□□ 0.23
NEDD4P46934 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 AGAP12P-201ENST00000585227 2359 ntBASIC16.48■□□□□ 0.23
NEDD4P46934 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.48■□□□□ 0.23
NEDD4P46934 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NEDD4P46934 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
NEDD4P46934 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NEDD4P46934 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.47■□□□□ 0.23
NEDD4P46934 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.47■□□□□ 0.23
NEDD4P46934 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
NEDD4P46934 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.47■□□□□ 0.23
NEDD4P46934 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.47■□□□□ 0.23
NEDD4P46934 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 AC018638.5-201ENST00000450885 754 ntBASIC16.47■□□□□ 0.23
NEDD4P46934 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
NEDD4P46934 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.47■□□□□ 0.23
NEDD4P46934 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.47■□□□□ 0.23
NEDD4P46934 AC132825.4-202ENST00000578792 434 ntBASIC16.47■□□□□ 0.23
NEDD4P46934 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.47■□□□□ 0.23
NEDD4P46934 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.47■□□□□ 0.23
NEDD4P46934 AL049840.2-201ENST00000602722 535 ntBASIC16.47■□□□□ 0.23
NEDD4P46934 AC091769.1-201ENST00000619576 568 ntBASIC16.47■□□□□ 0.23
NEDD4P46934 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
NEDD4P46934 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.47■□□□□ 0.23
NEDD4P46934 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.47■□□□□ 0.23
NEDD4P46934 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.47■□□□□ 0.23
NEDD4P46934 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.47■□□□□ 0.23
NEDD4P46934 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.47■□□□□ 0.23
NEDD4P46934 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.47■□□□□ 0.23
NEDD4P46934 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NEDD4P46934 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms