Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 NUP210P2-201ENST00000510577 282 ntBASIC15.14■□□□□ 0.01
HTTP42858 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC15.14■□□□□ 0.01
HTTP42858 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC15.14■□□□□ 0.01
HTTP42858 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC15.14■□□□□ 0.01
HTTP42858 AC116036.2-201ENST00000607592 462 ntBASIC15.14■□□□□ 0.01
HTTP42858 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTTP42858 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTTP42858 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTTP42858 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTTP42858 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 TBC1D3P1-201ENST00000590047 1693 ntBASIC15.13■□□□□ 0.01
HTTP42858 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 AC106881.1-201ENST00000605849 3329 ntBASIC15.13■□□□□ 0.01
HTTP42858 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HTTP42858 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HTTP42858 CACYBPP3-201ENST00000406011 625 ntBASIC15.13■□□□□ 0.01
HTTP42858 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 PTPA-219ENST00000435305 530 ntTSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 PARVG-208ENST00000466375 820 ntTSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
HTTP42858 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC15.13■□□□□ 0.01
HTTP42858 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 RPS9-213ENST00000626547 476 ntTSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HTTP42858 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HTTP42858 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HTTP42858 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.13■□□□□ 0.01
HTTP42858 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HTTP42858 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 DNM1P50-201ENST00000565767 508 ntBASIC15.13■□□□□ 0.01
HTTP42858 RN7SL750P-201ENST00000582814 238 ntBASIC15.13■□□□□ 0.01
HTTP42858 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HTTP42858 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC15.13■□□□□ 0.01
HTTP42858 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HTTP42858 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HTTP42858 LINC00638-201ENST00000555578 2518 ntBASIC15.13■□□□□ 0.01
HTTP42858 AC020763.3-201ENST00000625095 2904 ntBASIC15.13■□□□□ 0.01
HTTP42858 PKD1P6-201ENST00000343738 4769 ntBASIC15.13■□□□□ 0.01
HTTP42858 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 DERL1-204ENST00000519018 575 ntTSL 4 BASIC15.12■□□□□ 0.01
HTTP42858 AC010776.3-201ENST00000617349 424 ntBASIC15.12■□□□□ 0.01
HTTP42858 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC15.12■□□□□ 0.01
HTTP42858 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.12■□□□□ 0.01
HTTP42858 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC15.12■□□□□ 0.01
HTTP42858 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HTTP42858 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HTTP42858 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 AC005077.3-201ENST00000449614 213 ntBASIC15.12■□□□□ 0.01
HTTP42858 OARD1-214ENST00000486443 764 ntTSL 3 BASIC15.12■□□□□ 0.01
HTTP42858 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC15.12■□□□□ 0.01
HTTP42858 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.12■□□□□ 0.01
HTTP42858 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.12■□□□□ 0.01
HTTP42858 MED25-209ENST00000612791 881 ntTSL 5 BASIC15.12■□□□□ 0.01
HTTP42858 GH2-205ENST00000622506 702 ntTSL 5 BASIC15.12■□□□□ 0.01
HTTP42858 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.12■□□□□ 0.01
HTTP42858 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 AC113367.3-201ENST00000508316 1912 ntBASIC15.12■□□□□ 0.01
HTTP42858 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.12■□□□□ 0.01
HTTP42858 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HTTP42858 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HTTP42858 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HTTP42858 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HTTP42858 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 DIS3L2P1-201ENST00000509197 559 ntBASIC15.12■□□□□ 0.01
HTTP42858 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 AC018868.2-201ENST00000559655 1259 ntBASIC15.12■□□□□ 0.01
HTTP42858 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTTP42858 AC007274.3-201ENST00000619838 385 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms