Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 RPL13AP20-201ENST00000459725 609 ntBASIC14.41□□□□□ -0.1
FDFT1P37268 AC106794.1-201ENST00000506935 792 ntBASIC14.41□□□□□ -0.1
FDFT1P37268 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.41□□□□□ -0.1
FDFT1P37268 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.41□□□□□ -0.1
FDFT1P37268 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.41□□□□□ -0.1
FDFT1P37268 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FDFT1P37268 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FDFT1P37268 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.41□□□□□ -0.1
FDFT1P37268 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
FDFT1P37268 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.4□□□□□ -0.1
FDFT1P37268 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 AC008620.2-201ENST00000510294 1569 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FDFT1P37268 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
FDFT1P37268 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.4□□□□□ -0.1
FDFT1P37268 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FDFT1P37268 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.4□□□□□ -0.1
FDFT1P37268 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.4□□□□□ -0.1
FDFT1P37268 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
FDFT1P37268 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FDFT1P37268 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 AL591846.1-201ENST00000451736 433 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.4□□□□□ -0.1
FDFT1P37268 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
FDFT1P37268 IGHV3-71-201ENST00000523324 359 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.4□□□□□ -0.1
FDFT1P37268 AC009779.1-201ENST00000551138 283 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.4□□□□□ -0.1
FDFT1P37268 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.4□□□□□ -0.1
FDFT1P37268 MIR3615-201ENST00000581999 87 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.4□□□□□ -0.1
FDFT1P37268 AL132994.2-201ENST00000603120 687 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.4□□□□□ -0.1
FDFT1P37268 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
FDFT1P37268 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 FMO6P-201ENST00000236166 1620 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.4□□□□□ -0.1
FDFT1P37268 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
FDFT1P37268 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 AC114271.1-201ENST00000612689 2813 ntBASIC14.4□□□□□ -0.1
FDFT1P37268 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
FDFT1P37268 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FDFT1P37268 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FDFT1P37268 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
FDFT1P37268 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
FDFT1P37268 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 AL358781.1-202ENST00000321081 1360 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FDFT1P37268 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.39□□□□□ -0.11
FDFT1P37268 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
FDFT1P37268 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.39□□□□□ -0.11
FDFT1P37268 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms