Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.14□□□□□ -0.47
CD40P25942 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.14□□□□□ -0.47
CD40P25942 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.14□□□□□ -0.47
CD40P25942 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.14□□□□□ -0.47
CD40P25942 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.14□□□□□ -0.47
CD40P25942 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.14□□□□□ -0.47
CD40P25942 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.14□□□□□ -0.47
CD40P25942 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 KRT8P2-201ENST00000556193 944 ntBASIC12.14□□□□□ -0.47
CD40P25942 AC007952.4-201ENST00000573866 637 ntBASIC12.14□□□□□ -0.47
CD40P25942 SNORD3B-1-201ENST00000577988 758 ntBASIC12.14□□□□□ -0.47
CD40P25942 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
CD40P25942 AL359091.4-201ENST00000610052 409 ntBASIC12.14□□□□□ -0.47
CD40P25942 BAP1-211ENST00000615113 489 ntBASIC12.14□□□□□ -0.47
CD40P25942 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 AL589935.2-201ENST00000616471 1231 ntBASIC12.14□□□□□ -0.47
CD40P25942 MIR6858-201ENST00000620733 67 ntBASIC12.14□□□□□ -0.47
CD40P25942 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.14□□□□□ -0.47
CD40P25942 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 AC016397.2-201ENST00000624848 1985 ntBASIC12.14□□□□□ -0.47
CD40P25942 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CD40P25942 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.14□□□□□ -0.47
CD40P25942 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.14□□□□□ -0.47
CD40P25942 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD40P25942 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.13□□□□□ -0.47
CD40P25942 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.13□□□□□ -0.47
CD40P25942 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CD40P25942 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.13□□□□□ -0.47
CD40P25942 AC138761.6-201ENST00000583997 1423 ntBASIC12.13□□□□□ -0.47
CD40P25942 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.13□□□□□ -0.47
CD40P25942 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CD40P25942 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.13□□□□□ -0.47
CD40P25942 AC019109.1-201ENST00000401725 1874 ntBASIC12.13□□□□□ -0.47
CD40P25942 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 ODCP-201ENST00000459650 1639 ntBASIC12.13□□□□□ -0.47
CD40P25942 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CD40P25942 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.13□□□□□ -0.47
CD40P25942 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CD40P25942 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.13□□□□□ -0.47
CD40P25942 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.13□□□□□ -0.47
CD40P25942 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CD40P25942 AC068867.1-201ENST00000559855 150 ntBASIC12.13□□□□□ -0.47
CD40P25942 RN7SL357P-201ENST00000581065 298 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms