Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH3P22223 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.94□□□□□ -0.18
CDH3P22223 RN7SL720P-201ENST00000488178 304 ntBASIC13.94□□□□□ -0.18
CDH3P22223 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.94□□□□□ -0.18
CDH3P22223 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.94□□□□□ -0.18
CDH3P22223 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 AC003686.1-201ENST00000550956 1034 ntBASIC13.94□□□□□ -0.18
CDH3P22223 FGFR3P5-201ENST00000564496 886 ntBASIC13.94□□□□□ -0.18
CDH3P22223 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.94□□□□□ -0.18
CDH3P22223 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 AC021016.3-201ENST00000608367 477 ntBASIC13.94□□□□□ -0.18
CDH3P22223 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CDH3P22223 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.94□□□□□ -0.18
CDH3P22223 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDH3P22223 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDH3P22223 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDH3P22223 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 FRMPD2B-201ENST00000431305 1347 ntBASIC13.93□□□□□ -0.18
CDH3P22223 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDH3P22223 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.93□□□□□ -0.18
CDH3P22223 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 RN7SL574P-201ENST00000581512 297 ntBASIC13.93□□□□□ -0.18
CDH3P22223 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDH3P22223 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CDH3P22223 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH3P22223 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH3P22223 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDH3P22223 AC004899.2-201ENST00000622993 3860 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms