Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 RPL13P2-201ENST00000440687 659 ntBASIC10.87□□□□□ -0.67
RAB4AP20338 AL592309.1-201ENST00000443127 649 ntBASIC10.87□□□□□ -0.67
RAB4AP20338 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 TIMM8BP1-201ENST00000452384 211 ntBASIC10.87□□□□□ -0.67
RAB4AP20338 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.87□□□□□ -0.67
RAB4AP20338 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.87□□□□□ -0.67
RAB4AP20338 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.87□□□□□ -0.67
RAB4AP20338 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC10.87□□□□□ -0.67
RAB4AP20338 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.87□□□□□ -0.67
RAB4AP20338 MIR6074-201ENST00000612054 107 ntBASIC10.87□□□□□ -0.67
RAB4AP20338 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 MCU-204ENST00000536019 3224 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 AC131888.1-201ENST00000625028 2168 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
RAB4AP20338 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RAB4AP20338 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
RAB4AP20338 MRPL3P1-201ENST00000400109 1033 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC10.86□□□□□ -0.67
RAB4AP20338 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.86□□□□□ -0.67
RAB4AP20338 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
RAB4AP20338 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.86□□□□□ -0.67
RAB4AP20338 ALG1L8P-201ENST00000533887 760 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.86□□□□□ -0.67
RAB4AP20338 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RAB4AP20338 AC104692.2-201ENST00000603054 253 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 AC003101.2-201ENST00000612557 442 ntBASIC10.86□□□□□ -0.67
RAB4AP20338 LINC00628-201ENST00000628516 1289 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms