Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.05□□□□□ -0.16
NELFEP18615 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.05□□□□□ -0.16
NELFEP18615 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NELFEP18615 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.05□□□□□ -0.16
NELFEP18615 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.05□□□□□ -0.16
NELFEP18615 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.05□□□□□ -0.16
NELFEP18615 TMEM198B-204ENST00000484016 896 ntBASIC14.05□□□□□ -0.16
NELFEP18615 IMP3P2-201ENST00000489760 475 ntBASIC14.05□□□□□ -0.16
NELFEP18615 AC006122.1-201ENST00000493323 440 ntBASIC14.05□□□□□ -0.16
NELFEP18615 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.05□□□□□ -0.16
NELFEP18615 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
NELFEP18615 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.05□□□□□ -0.16
NELFEP18615 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.05□□□□□ -0.16
NELFEP18615 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.05□□□□□ -0.16
NELFEP18615 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 RBM8B-201ENST00000555532 525 ntBASIC14.05□□□□□ -0.16
NELFEP18615 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.05□□□□□ -0.16
NELFEP18615 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NELFEP18615 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.05□□□□□ -0.16
NELFEP18615 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 AC090505.1-201ENST00000430515 1834 ntBASIC14.04□□□□□ -0.16
NELFEP18615 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
NELFEP18615 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NELFEP18615 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NELFEP18615 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.04□□□□□ -0.16
NELFEP18615 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 AL596276.2-201ENST00000447525 331 ntBASIC14.04□□□□□ -0.16
NELFEP18615 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.04□□□□□ -0.16
NELFEP18615 NUP210P1-202ENST00000504322 710 ntBASIC14.04□□□□□ -0.16
NELFEP18615 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.04□□□□□ -0.16
NELFEP18615 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.04□□□□□ -0.16
NELFEP18615 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NELFEP18615 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.04□□□□□ -0.16
NELFEP18615 RN7SL574P-201ENST00000581512 297 ntBASIC14.04□□□□□ -0.16
NELFEP18615 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 AC015967.2-201ENST00000624092 234 ntBASIC14.04□□□□□ -0.16
NELFEP18615 AC006435.4-201ENST00000625037 234 ntBASIC14.04□□□□□ -0.16
NELFEP18615 AL356737.1-201ENST00000634391 234 ntBASIC14.04□□□□□ -0.16
NELFEP18615 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 KRT8P19-201ENST00000551916 1455 ntBASIC14.04□□□□□ -0.16
NELFEP18615 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 AL590440.2-201ENST00000641973 1595 ntBASIC14.04□□□□□ -0.16
NELFEP18615 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.04□□□□□ -0.16
NELFEP18615 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NELFEP18615 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NELFEP18615 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NELFEP18615 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms