Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TOP2AP11388 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
TOP2AP11388 AC024475.2-201ENST00000312173 879 ntBASIC23.65■■□□□ 1.38
TOP2AP11388 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC23.65■■□□□ 1.38
TOP2AP11388 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC23.65■■□□□ 1.38
TOP2AP11388 AL161727.1-201ENST00000457409 530 ntBASIC23.65■■□□□ 1.38
TOP2AP11388 RPL3P9-201ENST00000463217 1183 ntBASIC23.65■■□□□ 1.38
TOP2AP11388 RN7SL838P-201ENST00000481676 295 ntBASIC23.65■■□□□ 1.38
TOP2AP11388 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC23.65■■□□□ 1.38
TOP2AP11388 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC23.65■■□□□ 1.38
TOP2AP11388 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC23.65■■□□□ 1.38
TOP2AP11388 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TOP2AP11388 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TOP2AP11388 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TOP2AP11388 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TOP2AP11388 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TOP2AP11388 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TOP2AP11388 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC23.65■■□□□ 1.38
TOP2AP11388 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TOP2AP11388 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC23.65■■□□□ 1.38
TOP2AP11388 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TOP2AP11388 AC091807.1-201ENST00000418838 1544 ntBASIC23.65■■□□□ 1.38
TOP2AP11388 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC23.64■■□□□ 1.38
TOP2AP11388 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 AP000346.2-202ENST00000425948 383 ntBASIC23.64■■□□□ 1.38
TOP2AP11388 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC23.64■■□□□ 1.38
TOP2AP11388 ACTG1P23-201ENST00000437653 1074 ntBASIC23.64■■□□□ 1.38
TOP2AP11388 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC23.64■■□□□ 1.38
TOP2AP11388 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC23.64■■□□□ 1.38
TOP2AP11388 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC23.64■■□□□ 1.38
TOP2AP11388 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC23.64■■□□□ 1.38
TOP2AP11388 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 MIR6893-201ENST00000613458 69 ntBASIC23.64■■□□□ 1.38
TOP2AP11388 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TOP2AP11388 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC23.64■■□□□ 1.38
TOP2AP11388 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TOP2AP11388 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TOP2AP11388 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC23.64■■□□□ 1.37
TOP2AP11388 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
TOP2AP11388 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC23.64■■□□□ 1.37
TOP2AP11388 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC23.64■■□□□ 1.37
TOP2AP11388 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
TOP2AP11388 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
TOP2AP11388 TBC1D3P1-201ENST00000590047 1693 ntBASIC23.64■■□□□ 1.37
TOP2AP11388 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TOP2AP11388 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TOP2AP11388 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TOP2AP11388 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TOP2AP11388 AL954722.1-201ENST00000431238 259 ntBASIC23.64■■□□□ 1.37
TOP2AP11388 RN7SL22P-201ENST00000471800 269 ntBASIC23.64■■□□□ 1.37
TOP2AP11388 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TOP2AP11388 ALDOAP1-201ENST00000491506 1078 ntBASIC23.64■■□□□ 1.37
TOP2AP11388 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC23.64■■□□□ 1.37
TOP2AP11388 AL078624.1-201ENST00000604004 547 ntBASIC23.64■■□□□ 1.37
TOP2AP11388 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC23.64■■□□□ 1.37
TOP2AP11388 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC23.64■■□□□ 1.37
TOP2AP11388 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
TOP2AP11388 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC23.63■■□□□ 1.37
TOP2AP11388 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC23.63■■□□□ 1.37
TOP2AP11388 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
TOP2AP11388 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC23.63■■□□□ 1.37
TOP2AP11388 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 RPL4P6-201ENST00000438116 1304 ntBASIC23.63■■□□□ 1.37
TOP2AP11388 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 CACYBPP3-201ENST00000406011 625 ntBASIC23.63■■□□□ 1.37
TOP2AP11388 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC23.63■■□□□ 1.37
TOP2AP11388 HNRNPA1P55-201ENST00000505935 955 ntBASIC23.63■■□□□ 1.37
TOP2AP11388 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC23.63■■□□□ 1.37
TOP2AP11388 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC23.63■■□□□ 1.37
TOP2AP11388 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC23.63■■□□□ 1.37
TOP2AP11388 AL109954.3-201ENST00000615088 558 ntBASIC23.63■■□□□ 1.37
TOP2AP11388 AC244097.1-201ENST00000621631 1216 ntBASIC23.63■■□□□ 1.37
TOP2AP11388 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC23.63■■□□□ 1.37
TOP2AP11388 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC23.63■■□□□ 1.37
TOP2AP11388 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TOP2AP11388 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TOP2AP11388 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC23.62■■□□□ 1.37
TOP2AP11388 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TOP2AP11388 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TOP2AP11388 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC23.62■■□□□ 1.37
TOP2AP11388 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TOP2AP11388 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC23.62■■□□□ 1.37
TOP2AP11388 RN7SL47P-201ENST00000488710 299 ntBASIC23.62■■□□□ 1.37
TOP2AP11388 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC23.62■■□□□ 1.37
TOP2AP11388 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms