Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.38□□□□□ -0.43
SFTPBP07988 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SFTPBP07988 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.38□□□□□ -0.43
SFTPBP07988 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SFTPBP07988 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.38□□□□□ -0.43
SFTPBP07988 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 AC020658.7-201ENST00000624274 2442 ntBASIC12.37□□□□□ -0.43
SFTPBP07988 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPBP07988 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.37□□□□□ -0.43
SFTPBP07988 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPBP07988 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPBP07988 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.37□□□□□ -0.43
SFTPBP07988 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPBP07988 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPBP07988 RN7SL713P-201ENST00000582127 302 ntBASIC12.37□□□□□ -0.43
SFTPBP07988 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPBP07988 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.37□□□□□ -0.43
SFTPBP07988 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 AL358472.3-201ENST00000608147 415 ntBASIC12.37□□□□□ -0.43
SFTPBP07988 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SFTPBP07988 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 LINC02486-201ENST00000604157 3000 ntBASIC12.37□□□□□ -0.43
SFTPBP07988 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SFTPBP07988 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SFTPBP07988 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SFTPBP07988 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SFTPBP07988 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.36□□□□□ -0.43
SFTPBP07988 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms