Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.21□□□□□ -0.13
RETP07949 AGGF1P1-201ENST00000509500 2073 ntBASIC14.21□□□□□ -0.13
RETP07949 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.21□□□□□ -0.13
RETP07949 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.21□□□□□ -0.13
RETP07949 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RETP07949 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.21□□□□□ -0.13
RETP07949 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 PTGER4P2-201ENST00000328411 252 ntBASIC14.21□□□□□ -0.13
RETP07949 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.21□□□□□ -0.13
RETP07949 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.21□□□□□ -0.13
RETP07949 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.21□□□□□ -0.13
RETP07949 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.21□□□□□ -0.13
RETP07949 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.21□□□□□ -0.13
RETP07949 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.21□□□□□ -0.13
RETP07949 AC023141.7-201ENST00000430646 407 ntBASIC14.21□□□□□ -0.13
RETP07949 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.21□□□□□ -0.13
RETP07949 PTGER4P3-201ENST00000458150 252 ntBASIC14.21□□□□□ -0.13
RETP07949 SCARNA12-201ENST00000459155 270 ntBASIC14.21□□□□□ -0.13
RETP07949 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.21□□□□□ -0.13
RETP07949 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.21□□□□□ -0.13
RETP07949 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.21□□□□□ -0.13
RETP07949 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.21□□□□□ -0.13
RETP07949 AC018846.1-201ENST00000568231 183 ntBASIC14.21□□□□□ -0.13
RETP07949 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RETP07949 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.21□□□□□ -0.13
RETP07949 AL591471.1-201ENST00000621855 229 ntBASIC14.21□□□□□ -0.13
RETP07949 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.21□□□□□ -0.13
RETP07949 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RETP07949 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.21□□□□□ -0.13
RETP07949 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RETP07949 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RETP07949 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RETP07949 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
RETP07949 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.21□□□□□ -0.14
RETP07949 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.21□□□□□ -0.14
RETP07949 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RETP07949 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RETP07949 FUCA1P1-201ENST00000374476 1351 ntBASIC14.21□□□□□ -0.14
RETP07949 KRT8P28-201ENST00000433288 1390 ntBASIC14.21□□□□□ -0.14
RETP07949 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.21□□□□□ -0.14
RETP07949 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.14
RETP07949 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RETP07949 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.2□□□□□ -0.14
RETP07949 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RETP07949 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RETP07949 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.2□□□□□ -0.14
RETP07949 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RETP07949 AL929302.1-201ENST00000426556 871 ntBASIC14.2□□□□□ -0.14
RETP07949 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.2□□□□□ -0.14
RETP07949 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 AC092580.1-201ENST00000433998 658 ntBASIC14.2□□□□□ -0.14
RETP07949 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.2□□□□□ -0.14
RETP07949 ST13P19-201ENST00000442505 1124 ntBASIC14.2□□□□□ -0.14
RETP07949 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.2□□□□□ -0.14
RETP07949 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.2□□□□□ -0.14
RETP07949 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.2□□□□□ -0.14
RETP07949 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.2□□□□□ -0.14
RETP07949 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.2□□□□□ -0.14
RETP07949 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.2□□□□□ -0.14
RETP07949 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RETP07949 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RETP07949 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.2□□□□□ -0.14
RETP07949 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.2□□□□□ -0.14
RETP07949 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RETP07949 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RETP07949 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.2□□□□□ -0.14
RETP07949 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.2□□□□□ -0.14
RETP07949 AC005252.3-201ENST00000623855 2258 ntBASIC14.2□□□□□ -0.14
RETP07949 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms