Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 GH2-205ENST00000622506 702 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC8.37□□□□□ -1.07
APOBP04114 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
APOBP04114 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 STX3-207ENST00000633708 3111 ntTSL 5 BASIC8.37□□□□□ -1.07
APOBP04114 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
APOBP04114 AL139424.2-202ENST00000641335 1369 ntBASIC8.37□□□□□ -1.07
APOBP04114 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 AC069421.1-201ENST00000447462 323 ntBASIC8.36□□□□□ -1.07
APOBP04114 AC007279.1-201ENST00000448547 837 ntBASIC8.36□□□□□ -1.07
APOBP04114 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC8.36□□□□□ -1.07
APOBP04114 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC8.36□□□□□ -1.07
APOBP04114 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 RN7SL750P-201ENST00000582814 238 ntBASIC8.36□□□□□ -1.07
APOBP04114 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC8.36□□□□□ -1.07
APOBP04114 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 CYP2B7P-201ENST00000541697 1476 ntBASIC8.36□□□□□ -1.07
APOBP04114 AC061965.1-201ENST00000560524 1465 ntBASIC8.36□□□□□ -1.07
APOBP04114 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 TPO-203ENST00000346956 2923 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 FTLP16-201ENST00000446400 513 ntBASIC8.36□□□□□ -1.07
APOBP04114 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC8.36□□□□□ -1.07
APOBP04114 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC8.36□□□□□ -1.07
APOBP04114 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
APOBP04114 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 EGLN3-205ENST00000547327 2849 ntBASIC8.36□□□□□ -1.07
APOBP04114 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 GAPDHP29-201ENST00000429913 985 ntBASIC8.36□□□□□ -1.07
APOBP04114 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC8.36□□□□□ -1.07
APOBP04114 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC8.36□□□□□ -1.07
APOBP04114 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
APOBP04114 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
APOBP04114 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
APOBP04114 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms