Protein–RNA interactions for Protein: P02776

PF4, Platelet factor 4, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4P02776 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC10.98□□□□□ -0.65
PF4P02776 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PF4P02776 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
PF4P02776 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 AC006486.2-201ENST00000624246 2199 ntBASIC10.97□□□□□ -0.65
PF4P02776 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 AC018529.2-202ENST00000611482 3087 ntBASIC10.97□□□□□ -0.65
PF4P02776 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 MIR645-201ENST00000385283 94 ntBASIC10.97□□□□□ -0.65
PF4P02776 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
PF4P02776 AL157792.1-201ENST00000488281 530 ntBASIC10.97□□□□□ -0.65
PF4P02776 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC10.97□□□□□ -0.65
PF4P02776 MRPL22P1-201ENST00000505398 616 ntBASIC10.97□□□□□ -0.65
PF4P02776 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC10.97□□□□□ -0.65
PF4P02776 CTBP2P4-201ENST00000513884 920 ntBASIC10.97□□□□□ -0.65
PF4P02776 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 CR383656.3-201ENST00000551315 183 ntBASIC10.97□□□□□ -0.65
PF4P02776 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC10.97□□□□□ -0.65
PF4P02776 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC10.97□□□□□ -0.65
PF4P02776 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC10.97□□□□□ -0.65
PF4P02776 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
PF4P02776 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 AP001184.1-201ENST00000637936 376 ntBASIC10.97□□□□□ -0.65
PF4P02776 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
PF4P02776 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
PF4P02776 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
PF4P02776 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.97□□□□□ -0.65
PF4P02776 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 APOBEC3D-201ENST00000216099 2528 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
PF4P02776 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
PF4P02776 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms