Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.59□□□□□ -0.39
APOC1P02654 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.59□□□□□ -0.39
APOC1P02654 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC1P02654 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.59□□□□□ -0.39
APOC1P02654 BEND3P3-201ENST00000611030 2440 ntBASIC12.59□□□□□ -0.39
APOC1P02654 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 AL008718.2-201ENST00000609206 1313 ntBASIC12.59□□□□□ -0.39
APOC1P02654 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.59□□□□□ -0.39
APOC1P02654 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APOC1P02654 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.58□□□□□ -0.39
APOC1P02654 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
APOC1P02654 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC1P02654 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC1P02654 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
APOC1P02654 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
APOC1P02654 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 AL512310.5-201ENST00000551999 515 ntBASIC12.58□□□□□ -0.4
APOC1P02654 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.58□□□□□ -0.4
APOC1P02654 AC124068.2-201ENST00000569473 1109 ntBASIC12.58□□□□□ -0.4
APOC1P02654 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC1P02654 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 AC105233.6-201ENST00000642093 218 ntBASIC12.58□□□□□ -0.4
APOC1P02654 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
APOC1P02654 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.58□□□□□ -0.4
APOC1P02654 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 AHCYP4-201ENST00000419201 1315 ntBASIC12.58□□□□□ -0.4
APOC1P02654 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
APOC1P02654 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.58□□□□□ -0.4
APOC1P02654 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC1P02654 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 E2F3P2-201ENST00000447755 1422 ntBASIC12.57□□□□□ -0.4
APOC1P02654 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC1P02654 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 AL157996.1-201ENST00000624684 2299 ntBASIC12.57□□□□□ -0.4
APOC1P02654 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 MEX3B-202ENST00000558133 4333 ntBASIC12.57□□□□□ -0.4
APOC1P02654 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC1P02654 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
APOC1P02654 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.57□□□□□ -0.4
APOC1P02654 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
APOC1P02654 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.57□□□□□ -0.4
APOC1P02654 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
APOC1P02654 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
APOC1P02654 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms