Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PDGFBP01127 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDGFBP01127 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDGFBP01127 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
PDGFBP01127 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PDGFBP01127 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.91□□□□□ -0.18
PDGFBP01127 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.91□□□□□ -0.18
PDGFBP01127 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 AC022532.1-201ENST00000624563 1728 ntBASIC13.91□□□□□ -0.18
PDGFBP01127 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDGFBP01127 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 U3.41-201ENST00000408711 219 ntBASIC13.91□□□□□ -0.18
PDGFBP01127 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 AC004910.1-201ENST00000433493 787 ntBASIC13.91□□□□□ -0.18
PDGFBP01127 SRP9P1-201ENST00000445874 261 ntBASIC13.91□□□□□ -0.18
PDGFBP01127 AC069421.1-201ENST00000447462 323 ntBASIC13.91□□□□□ -0.18
PDGFBP01127 AC015818.1-201ENST00000451011 244 ntBASIC13.91□□□□□ -0.18
PDGFBP01127 ALDOAP1-201ENST00000491506 1078 ntBASIC13.91□□□□□ -0.18
PDGFBP01127 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC13.91□□□□□ -0.18
PDGFBP01127 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.91□□□□□ -0.18
PDGFBP01127 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC13.91□□□□□ -0.18
PDGFBP01127 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 COG6-212ENST00000630730 186 ntTSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC13.91□□□□□ -0.18
PDGFBP01127 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PDGFBP01127 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.91□□□□□ -0.18
PDGFBP01127 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDGFBP01127 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PDGFBP01127 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.9□□□□□ -0.18
PDGFBP01127 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.9□□□□□ -0.18
PDGFBP01127 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.9□□□□□ -0.18
PDGFBP01127 AL591499.1-201ENST00000307155 1153 ntBASIC13.9□□□□□ -0.18
PDGFBP01127 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 AC005722.1-201ENST00000431878 964 ntBASIC13.9□□□□□ -0.18
PDGFBP01127 AC103724.2-201ENST00000520355 476 ntBASIC13.9□□□□□ -0.18
PDGFBP01127 RPL10P8-201ENST00000522888 313 ntBASIC13.9□□□□□ -0.18
PDGFBP01127 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
PDGFBP01127 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.9□□□□□ -0.18
PDGFBP01127 AL136298.3-201ENST00000556746 445 ntBASIC13.9□□□□□ -0.18
PDGFBP01127 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC13.9□□□□□ -0.18
PDGFBP01127 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC13.9□□□□□ -0.18
PDGFBP01127 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC13.9□□□□□ -0.18
PDGFBP01127 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDGFBP01127 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.9□□□□□ -0.18
PDGFBP01127 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms