Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AL591471.1-201ENST00000621855 229 ntBASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AHCYP4-201ENST00000419201 1315 ntBASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AL022313.4-201ENST00000562756 2046 ntBASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
HLA-DRB4X5D2U9 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AGER-214ENST00000538695 487 ntTSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AC005324.6-201ENST00000587972 613 ntBASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AC007663.3-201ENST00000609632 465 ntBASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AC005695.3-201ENST00000614522 232 ntBASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AC090386.2-201ENST00000623010 1039 ntBASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.71□□□□□ -0.69
HLA-DRB4X5D2U9 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
HLA-DRB4X5D2U9 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
HLA-DRB4X5D2U9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms