Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 FAM90A12P-201ENST00000519497 2375 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 FAM90A24P-201ENST00000520792 2369 ntBASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
POLR1DQ9Y2S0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC063926.2-201ENST00000623766 1308 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 REXO1L6P-201ENST00000603433 1515 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 ANKRD19P-201ENST00000338192 862 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC099336.1-201ENST00000417053 1171 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AL354877.1-201ENST00000424412 413 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CSF2RBP1-201ENST00000447905 391 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 KRT223P-202ENST00000449164 1292 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC140658.4-201ENST00000561990 352 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AP005482.1-201ENST00000563722 1273 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC008805.1-201ENST00000590892 364 ntBASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
POLR1DQ9Y2S0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 AC015909.5-201ENST00000624336 2266 ntBASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.68□□□□□ -0.38
POLR1DQ9Y2S0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms