Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MIR4783-201ENST00000580343 82 ntBASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 MIR6720-201ENST00000611664 98 ntBASIC12.66□□□□□ -0.38
COPS3Q9UNS2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.66□□□□□ -0.38
COPS3Q9UNS2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AC244394.1-201ENST00000435000 1665 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AL355102.3-201ENST00000554299 1678 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AC112492.5-201ENST00000421897 457 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AC136604.1-202ENST00000425471 771 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AC007551.1-201ENST00000457394 519 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 KRT18P15-201ENST00000458108 1291 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AL512310.5-201ENST00000551999 515 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 RBM8B-201ENST00000555532 525 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 DUX4L46-201ENST00000566845 751 ntBASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
COPS3Q9UNS2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
COPS3Q9UNS2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
COPS3Q9UNS2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
COPS3Q9UNS2 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS3Q9UNS2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms