Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AP005018.2-201ENST00000528464 822 ntBASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RIMBP3Q9UFD9 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 PHBP11-201ENST00000420550 809 ntBASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 MTND6P11-201ENST00000431890 483 ntBASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 AC087752.3-201ENST00000523905 709 ntTSL 2 BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 IGHV1OR16-2-201ENST00000564937 349 ntBASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 AC009086.1-201ENST00000567219 309 ntBASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 AC093159.2-201ENST00000603429 636 ntBASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIMBP3Q9UFD9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RIMBP3Q9UFD9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
RIMBP3Q9UFD9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.08■□□□□ 0.96
RIMBP3Q9UFD9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RIMBP3Q9UFD9 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RIMBP3Q9UFD9 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 PPP1R32-202ENST00000366212 488 ntTSL 2 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AC068620.1-201ENST00000470544 798 ntBASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AC008738.4-201ENST00000590492 700 ntTSL 3 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AF013593.1-201ENST00000458074 1487 ntBASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 GYG2P1-203ENST00000382965 149 ntBASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 OR7E33P-201ENST00000437705 966 ntBASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AC022447.6-201ENST00000515522 438 ntBASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 HPR-203ENST00000561690 634 ntTSL 5 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 MIR4761-201ENST00000585066 82 ntBASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 AC003005.2-201ENST00000595422 539 ntTSL 4 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC21.07■□□□□ 0.96
RIMBP3Q9UFD9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 CCDC70-201ENST00000242819 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 S100A1-203ENST00000368698 784 ntTSL 2 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 CDY6P-201ENST00000413320 1266 ntBASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 LINC01044-201ENST00000413637 657 ntTSL 3 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 CNN2P9-201ENST00000417134 909 ntBASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 AP001476.2-201ENST00000435738 355 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 RN7SL553P-201ENST00000482215 298 ntBASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 AC133548.2-202ENST00000562267 148 ntBASIC21.06■□□□□ 0.96
RIMBP3Q9UFD9 RN7SL678P-201ENST00000579533 299 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms