Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.35□□□□□ -0.11
HACD3Q9P035 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.35□□□□□ -0.11
HACD3Q9P035 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.35□□□□□ -0.11
HACD3Q9P035 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.35□□□□□ -0.11
HACD3Q9P035 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 AC007274.1-201ENST00000439805 662 ntBASIC14.35□□□□□ -0.11
HACD3Q9P035 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.35□□□□□ -0.11
HACD3Q9P035 SCARNA20.5-201ENST00000516991 142 ntBASIC14.35□□□□□ -0.11
HACD3Q9P035 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.35□□□□□ -0.11
HACD3Q9P035 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.35□□□□□ -0.11
HACD3Q9P035 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.35□□□□□ -0.11
HACD3Q9P035 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.35□□□□□ -0.11
HACD3Q9P035 AL645939.5-201ENST00000606834 243 ntBASIC14.35□□□□□ -0.11
HACD3Q9P035 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.35□□□□□ -0.11
HACD3Q9P035 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HACD3Q9P035 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.35□□□□□ -0.11
HACD3Q9P035 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.35□□□□□ -0.11
HACD3Q9P035 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HACD3Q9P035 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.35□□□□□ -0.11
HACD3Q9P035 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HACD3Q9P035 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HACD3Q9P035 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 RPL13AP3-202ENST00000494676 1473 ntBASIC14.34□□□□□ -0.11
HACD3Q9P035 AC138028.6-201ENST00000616106 1482 ntBASIC14.34□□□□□ -0.11
HACD3Q9P035 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.34□□□□□ -0.11
HACD3Q9P035 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
HACD3Q9P035 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 AC016700.1-201ENST00000429424 312 ntBASIC14.34□□□□□ -0.11
HACD3Q9P035 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.34□□□□□ -0.11
HACD3Q9P035 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.34□□□□□ -0.11
HACD3Q9P035 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.34□□□□□ -0.11
HACD3Q9P035 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.34□□□□□ -0.11
HACD3Q9P035 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 RN7SL530P-201ENST00000485097 298 ntBASIC14.34□□□□□ -0.11
HACD3Q9P035 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.34□□□□□ -0.11
HACD3Q9P035 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.34□□□□□ -0.11
HACD3Q9P035 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.34□□□□□ -0.11
HACD3Q9P035 AC105206.1-202ENST00000314927 2368 ntBASIC14.34□□□□□ -0.11
HACD3Q9P035 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
HACD3Q9P035 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HACD3Q9P035 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HACD3Q9P035 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
HACD3Q9P035 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HACD3Q9P035 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.33□□□□□ -0.11
HACD3Q9P035 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.33□□□□□ -0.11
HACD3Q9P035 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HACD3Q9P035 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms