Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.14□□□□□ -0.47
GFI1Q99684 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 LINC01815-202ENST00000641468 1409 ntBASIC12.14□□□□□ -0.47
GFI1Q99684 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
GFI1Q99684 AC144522.1-201ENST00000625111 1658 ntBASIC12.14□□□□□ -0.47
GFI1Q99684 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 MIR1202-201ENST00000408529 83 ntBASIC12.14□□□□□ -0.47
GFI1Q99684 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.14□□□□□ -0.47
GFI1Q99684 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.14□□□□□ -0.47
GFI1Q99684 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 FAM207CP-201ENST00000443486 507 ntBASIC12.14□□□□□ -0.47
GFI1Q99684 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.14□□□□□ -0.47
GFI1Q99684 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 USP32P1-208ENST00000506594 1164 ntBASIC12.14□□□□□ -0.47
GFI1Q99684 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
GFI1Q99684 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 AC139530.3-201ENST00000620344 690 ntBASIC12.14□□□□□ -0.47
GFI1Q99684 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
GFI1Q99684 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
GFI1Q99684 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
GFI1Q99684 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.14□□□□□ -0.47
GFI1Q99684 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.14□□□□□ -0.47
GFI1Q99684 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
GFI1Q99684 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.14□□□□□ -0.47
GFI1Q99684 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GFI1Q99684 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.13□□□□□ -0.47
GFI1Q99684 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.13□□□□□ -0.47
GFI1Q99684 AC008040.5-201ENST00000599781 1781 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
GFI1Q99684 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 AC006001.1-201ENST00000325130 474 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
GFI1Q99684 TUBB2BP1-201ENST00000404155 871 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 AC112492.5-201ENST00000421897 457 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.13□□□□□ -0.47
GFI1Q99684 AC002472.2-201ENST00000442739 958 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 AC006122.1-201ENST00000493323 440 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
GFI1Q99684 GOLGA2P8-201ENST00000505201 779 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 AC100850.1-201ENST00000506768 649 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 SLC25A47P1-201ENST00000531577 414 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 KRT90P-201ENST00000549264 1064 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
GFI1Q99684 RN7SL204P-201ENST00000582831 262 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 AC005962.1-201ENST00000584100 773 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.13□□□□□ -0.47
GFI1Q99684 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.13□□□□□ -0.47
GFI1Q99684 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 AJ011932.1-201ENST00000621707 465 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.13□□□□□ -0.47
GFI1Q99684 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
GFI1Q99684 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GFI1Q99684 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.13□□□□□ -0.47
GFI1Q99684 AC008764.8-201ENST00000623966 2717 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 RPL13AP3-202ENST00000494676 1473 ntBASIC12.13□□□□□ -0.47
GFI1Q99684 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms