Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 MIR4265-201ENST00000582152 99 ntBASIC20.3■□□□□ 0.84
SIN3AQ96ST3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 MANEA-AS1-201ENST00000564541 2268 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 AC019109.1-201ENST00000401725 1874 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 PYY2-201ENST00000315776 282 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 SNORA50C-201ENST00000408535 133 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 LINC00265-2P-201ENST00000413372 782 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 AC079328.1-201ENST00000560358 952 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 AC005632.3-201ENST00000605544 308 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 YRDCP1-201ENST00000621419 643 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 SNORA50.1-201ENST00000628590 135 ntBASIC20.29■□□□□ 0.84
SIN3AQ96ST3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.29■□□□□ 0.84
SIN3AQ96ST3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AC005722.1-201ENST00000431878 964 ntBASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AC145285.5-201ENST00000562217 361 ntBASIC20.28■□□□□ 0.84
SIN3AQ96ST3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AC103691.2-201ENST00000618824 433 ntBASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AC025262.2-201ENST00000623975 1056 ntBASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AP001184.1-201ENST00000637936 376 ntBASIC20.28■□□□□ 0.84
SIN3AQ96ST3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 NRADDP-202ENST00000641269 1585 ntBASIC20.28■□□□□ 0.84
SIN3AQ96ST3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AC020763.3-201ENST00000625095 2904 ntBASIC20.28■□□□□ 0.84
SIN3AQ96ST3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIN3AQ96ST3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 PES1P2-201ENST00000449745 1735 ntBASIC20.27■□□□□ 0.84
SIN3AQ96ST3 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIN3AQ96ST3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms