Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC020917.4-201ENST00000623994 1999 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 SNORA50C-201ENST00000408535 133 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 FAM207CP-201ENST00000443486 507 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 SPTLC1P1-201ENST00000447199 261 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC093433.1-201ENST00000458048 571 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 LINC02560-201ENST00000596379 459 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC021016.3-201ENST00000608367 477 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC004790.1-201ENST00000612686 536 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC027601.3-201ENST00000622907 509 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 SNORA50.1-201ENST00000628590 135 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 AL023775.1-201ENST00000454907 1746 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 PCDHB19P-202ENST00000625133 2914 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
RAB40CQ96S21 LAP3P2-201ENST00000454686 1454 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 AC007541.1-201ENST00000570282 1469 ntBASIC11.51□□□□□ -0.57
RAB40CQ96S21 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RAB40CQ96S21 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 AC003958.1-201ENST00000435883 421 ntBASIC11.5□□□□□ -0.57
RAB40CQ96S21 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 AC009486.1-201ENST00000569860 813 ntBASIC11.5□□□□□ -0.57
RAB40CQ96S21 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.5□□□□□ -0.57
RAB40CQ96S21 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.5□□□□□ -0.57
RAB40CQ96S21 SLC7A15P-201ENST00000424028 1363 ntBASIC11.5□□□□□ -0.57
RAB40CQ96S21 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB40CQ96S21 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms