Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-CQ95604 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-CQ95604 AC068418.2-201ENST00000577309 3703 ntBASIC14.35□□□□□ -0.11
HLA-CQ95604 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-CQ95604 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-CQ95604 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-CQ95604 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-CQ95604 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-CQ95604 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-CQ95604 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-CQ95604 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-CQ95604 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
HLA-CQ95604 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-CQ95604 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-CQ95604 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-CQ95604 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 AL365203.3-201ENST00000609742 2057 ntBASIC14.34□□□□□ -0.11
HLA-CQ95604 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 OR7E12P-201ENST00000344740 973 ntBASIC14.34□□□□□ -0.11
HLA-CQ95604 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 AL627095.1-201ENST00000414775 321 ntBASIC14.34□□□□□ -0.11
HLA-CQ95604 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 RPSAP6-201ENST00000417882 882 ntBASIC14.34□□□□□ -0.11
HLA-CQ95604 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.34□□□□□ -0.11
HLA-CQ95604 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-CQ95604 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-CQ95604 AL049829.1-201ENST00000465411 156 ntBASIC14.34□□□□□ -0.11
HLA-CQ95604 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-CQ95604 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-CQ95604 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-CQ95604 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-CQ95604 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.34□□□□□ -0.11
HLA-CQ95604 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-CQ95604 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-CQ95604 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HLA-CQ95604 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-CQ95604 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
HLA-CQ95604 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-CQ95604 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-CQ95604 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-CQ95604 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-CQ95604 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-CQ95604 DLX4-206ENST00000611342 1662 ntBASIC14.33□□□□□ -0.11
HLA-CQ95604 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-CQ95604 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-CQ95604 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-CQ95604 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-CQ95604 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-CQ95604 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC14.33□□□□□ -0.12
HLA-CQ95604 ELOCP6-201ENST00000429066 328 ntBASIC14.33□□□□□ -0.12
HLA-CQ95604 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-CQ95604 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 ELOCP12-201ENST00000458706 328 ntBASIC14.33□□□□□ -0.12
HLA-CQ95604 RN7SL2-201ENST00000490232 300 ntBASIC14.33□□□□□ -0.12
HLA-CQ95604 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-CQ95604 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-CQ95604 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms