Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AL807761.2-201ENST00000422849 729 ntBASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 DUX4L50-201ENST00000455245 715 ntBASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 MIR4522-201ENST00000584932 87 ntBASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SHROOM3Q8TF72 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 FGFR3P1-201ENST00000449999 601 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 STK24P1-201ENST00000455035 1291 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC024681.1-201ENST00000521917 487 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC020658.7-201ENST00000624274 2442 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AC005722.1-201ENST00000431878 964 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 PIN4P1-201ENST00000451079 396 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 RTN3P1-201ENST00000536295 711 ntBASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.31□□□□□ -0.12
SHROOM3Q8TF72 AL356740.1-201ENST00000602192 1297 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms