Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AC020658.7-201ENST00000624274 2442 ntBASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AL591122.2-201ENST00000624125 1853 ntBASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AC100850.1-201ENST00000506768 649 ntBASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 IGHV3-72-202ENST00000621503 303 ntBASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AHCYP4-201ENST00000419201 1315 ntBASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AL365181.3-201ENST00000605886 3222 ntBASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS37AQ8NEZ2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 HMGN1P19-201ENST00000436976 333 ntBASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 KLF2P4-201ENST00000451959 1225 ntBASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 AC133540.1-201ENST00000620845 1019 ntBASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 AC008687.7-202ENST00000637404 953 ntBASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS37AQ8NEZ2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms