Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AL136309.1-201ENST00000403917 691 ntBASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC016694.1-201ENST00000434179 700 ntBASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 RN7SL713P-201ENST00000582127 302 ntBASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC233724.13-201ENST00000598383 410 ntBASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC027601.3-201ENST00000622907 509 ntBASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 TNRC18P1-201ENST00000502875 3650 ntBASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DNAAF1Q8NEP3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 USP32P1-208ENST00000506594 1164 ntBASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AP003171.2-201ENST00000528208 925 ntBASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 AL355385.1-201ENST00000606123 409 ntBASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
DNAAF1Q8NEP3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms