Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 LINC02486-201ENST00000604157 3000 ntBASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 RCC2P1-201ENST00000452257 1476 ntBASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AC011742.3-201ENST00000439053 820 ntBASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AC004898.1-201ENST00000451057 766 ntBASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AC104306.2-201ENST00000451877 341 ntBASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AL008638.5-201ENST00000623814 1298 ntBASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 AC072061.1-201ENST00000569710 2234 ntBASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TTC9CQ8N5M4 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 EIF4HP1-201ENST00000453115 687 ntBASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AL008721.1-201ENST00000609964 604 ntBASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AL157813.1-201ENST00000612996 587 ntBASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 MIR6752-201ENST00000618442 71 ntBASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 AL033527.4-201ENST00000641026 673 ntBASIC11.2□□□□□ -0.62
TTC9CQ8N5M4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms