Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC023141.7-201ENST00000430646 407 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 HLA-DPA2-205ENST00000433582 733 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 OR2R1P-201ENST00000441404 914 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 AC026470.1-201ENST00000478038 846 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 RN7SL23P-201ENST00000484055 275 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC15.02■□□□□ -0
RNF135Q8IUD6 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.02■□□□□ -0
RNF135Q8IUD6 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.02■□□□□ -0
RNF135Q8IUD6 TREHP1-201ENST00000531328 465 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 OR5BD1P-201ENST00000532527 817 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.02■□□□□ -0
RNF135Q8IUD6 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
RNF135Q8IUD6 AC010326.4-201ENST00000604665 891 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.02■□□□□ -0
RNF135Q8IUD6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF135Q8IUD6 BX640514.1-201ENST00000583223 1918 ntBASIC15.02□□□□□ -0.01
RNF135Q8IUD6 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.01□□□□□ -0.01
RNF135Q8IUD6 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 GNG10P1-201ENST00000452289 199 ntBASIC15.01□□□□□ -0.01
RNF135Q8IUD6 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 RPL18AP8-201ENST00000486071 528 ntBASIC15.01□□□□□ -0.01
RNF135Q8IUD6 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 PTENP1-202ENST00000532280 3996 ntBASIC15.01□□□□□ -0.01
RNF135Q8IUD6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF135Q8IUD6 AC131212.3-201ENST00000624087 4219 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF135Q8IUD6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15□□□□□ -0.01
RNF135Q8IUD6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms