Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AL122018.1-201ENST00000446607 2310 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 SSR1P1-201ENST00000407630 814 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 OR52M2P-201ENST00000414298 959 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 HMGA1P1-201ENST00000415560 1062 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AC108734.2-201ENST00000420887 1069 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 KRT18P15-201ENST00000458108 1291 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AP005264.5-201ENST00000590066 467 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AL031673.1-201ENST00000611460 466 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 AC005912.2-201ENST00000619492 2400 ntBASIC15.7■□□□□ 0.1
TRIM50Q86XT4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.7■□□□□ 0.1
TRIM50Q86XT4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 BAK1P1-201ENST00000317045 636 ntBASIC15.69■□□□□ 0.1
TRIM50Q86XT4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 RN7SL375P-201ENST00000492442 298 ntBASIC15.69■□□□□ 0.1
TRIM50Q86XT4 AC226150.1-201ENST00000544259 466 ntBASIC15.69■□□□□ 0.1
TRIM50Q86XT4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRIM50Q86XT4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms