Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 LILRP2-202ENST00000413572 1383 ntBASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD4Q5XG99 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AC020931.1-201ENST00000589622 1346 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 SNORA57-201ENST00000383870 149 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 GGTLC4P-201ENST00000402176 664 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AC041040.1-201ENST00000425197 460 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AC103563.1-201ENST00000429316 123 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 RPSAP12-201ENST00000435879 888 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AC079414.2-201ENST00000567157 1104 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 MIR4326-201ENST00000582203 59 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 FGD5P1-202ENST00000614866 2498 ntBASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD4Q5XG99 AC008536.3-201ENST00000623282 1599 ntBASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 RNA5SP491-201ENST00000362936 118 ntBASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 HLA-DMA-202ENST00000395303 1007 ntBASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 AC133141.1-201ENST00000443015 339 ntBASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 URB1-AS1-201ENST00000534991 831 ntBASIC13.66□□□□□ -0.22
LYSMD4Q5XG99 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms