Protein–RNA interactions for Protein: Q49AH0

CDNF, Cerebral dopamine neurotrophic factor, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDNFQ49AH0 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.23□□□□□ -0.45
CDNFQ49AH0 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.23□□□□□ -0.45
CDNFQ49AH0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDNFQ49AH0 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.22□□□□□ -0.45
CDNFQ49AH0 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AL162726.2-201ENST00000438986 1017 ntBASIC12.22□□□□□ -0.45
CDNFQ49AH0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 INE1-201ENST00000456273 945 ntBASIC12.22□□□□□ -0.45
CDNFQ49AH0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AP001160.2-201ENST00000596071 487 ntBASIC12.22□□□□□ -0.45
CDNFQ49AH0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AC027601.3-201ENST00000622907 509 ntBASIC12.22□□□□□ -0.45
CDNFQ49AH0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CDNFQ49AH0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CDNFQ49AH0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 TRIM80P-201ENST00000455685 2848 ntBASIC12.21□□□□□ -0.45
CDNFQ49AH0 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 AL391825.1-201ENST00000457671 1364 ntBASIC12.21□□□□□ -0.45
CDNFQ49AH0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 KRT18P28-201ENST00000453838 1332 ntBASIC12.21□□□□□ -0.45
CDNFQ49AH0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 TPM3P8-201ENST00000330554 643 ntBASIC12.21□□□□□ -0.45
CDNFQ49AH0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CDNFQ49AH0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.21□□□□□ -0.45
CDNFQ49AH0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms