Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 AC124319.4-201ENST00000622931 2161 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.95□□□□□ -0.5
SSBP1Q04837 CD8B2-202ENST00000417670 633 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 UPF3AP3-201ENST00000420996 769 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.95□□□□□ -0.5
SSBP1Q04837 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 BASP1P1-201ENST00000430708 665 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 AL162726.2-201ENST00000438986 1017 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 GOLGA2P8-201ENST00000505201 779 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.95□□□□□ -0.5
SSBP1Q04837 IGHV3-42-201ENST00000520410 361 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 SNHG9-202ENST00000564014 471 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.95□□□□□ -0.5
SSBP1Q04837 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.95□□□□□ -0.5
SSBP1Q04837 AL356740.1-201ENST00000602192 1297 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 AL591471.1-201ENST00000621855 229 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.95□□□□□ -0.5
SSBP1Q04837 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
SSBP1Q04837 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 RPL13AP3-202ENST00000494676 1473 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.95□□□□□ -0.5
SSBP1Q04837 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SSBP1Q04837 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.94□□□□□ -0.5
SSBP1Q04837 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SSBP1Q04837 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 TPM3P8-201ENST00000330554 643 ntBASIC11.94□□□□□ -0.5
SSBP1Q04837 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP1Q04837 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.94□□□□□ -0.5
SSBP1Q04837 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
SSBP1Q04837 FAM86GP-201ENST00000448322 971 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms