Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST1H3AP68431 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST1H3AP68431 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H3AP68431 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H3AP68431 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H3AP68431 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST1H3AP68431 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 AC093462.1-201ENST00000621167 1683 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 AC006987.1-201ENST00000413610 527 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 BX679664.3-201ENST00000414070 555 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 AC016700.1-201ENST00000429424 312 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 DUX4L50-201ENST00000455245 715 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 AC113935.1-201ENST00000471722 555 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 AC091804.1-201ENST00000486888 567 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 AC005740.1-201ENST00000515639 522 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 AL022328.3-201ENST00000607943 679 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 MIR6752-201ENST00000618442 71 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 AL805961.1-203ENST00000641078 1258 ntBASIC12.33□□□□□ -0.44
HIST1H3AP68431 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H3AP68431 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H3AP68431 CICP8-201ENST00000455800 2813 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms