Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SKP1P63208 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 KRT8P24-201ENST00000560290 1559 ntBASIC13.45□□□□□ -0.26
SKP1P63208 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SKP1P63208 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.44□□□□□ -0.26
SKP1P63208 CSPG4P11-201ENST00000560634 4910 ntBASIC13.44□□□□□ -0.26
SKP1P63208 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SKP1P63208 AC073869.2-201ENST00000417338 1026 ntBASIC13.44□□□□□ -0.26
SKP1P63208 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 AC098934.1-203ENST00000442868 1262 ntBASIC13.44□□□□□ -0.26
SKP1P63208 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.44□□□□□ -0.26
SKP1P63208 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 AP000358.1-201ENST00000456260 156 ntBASIC13.44□□□□□ -0.26
SKP1P63208 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.44□□□□□ -0.26
SKP1P63208 ALG1L13P-202ENST00000519320 584 ntBASIC13.44□□□□□ -0.26
SKP1P63208 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.44□□□□□ -0.26
SKP1P63208 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.44□□□□□ -0.26
SKP1P63208 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.44□□□□□ -0.26
SKP1P63208 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.44□□□□□ -0.26
SKP1P63208 AL109837.1-201ENST00000603272 613 ntBASIC13.44□□□□□ -0.26
SKP1P63208 AC012044.1-201ENST00000603431 297 ntBASIC13.44□□□□□ -0.26
SKP1P63208 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 TBC1D3J-201ENST00000620719 1426 ntBASIC13.44□□□□□ -0.26
SKP1P63208 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.44□□□□□ -0.26
SKP1P63208 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SKP1P63208 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.43□□□□□ -0.26
SKP1P63208 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.43□□□□□ -0.26
SKP1P63208 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.43□□□□□ -0.26
SKP1P63208 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SKP1P63208 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.43□□□□□ -0.26
SKP1P63208 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SKP1P63208 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.43□□□□□ -0.26
SKP1P63208 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.43□□□□□ -0.26
SKP1P63208 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.43□□□□□ -0.26
SKP1P63208 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SKP1P63208 UPF3AP2-201ENST00000457924 1132 ntBASIC13.43□□□□□ -0.26
SKP1P63208 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.43□□□□□ -0.26
SKP1P63208 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.43□□□□□ -0.26
SKP1P63208 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms