Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
VBP1P61758 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VBP1P61758 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VBP1P61758 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 LRRC59-203ENST00000576448 1531 ntBASIC12.67□□□□□ -0.38
VBP1P61758 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 AL132642.2-201ENST00000623423 1998 ntBASIC12.67□□□□□ -0.38
VBP1P61758 AC010536.1-201ENST00000538868 2611 ntBASIC12.67□□□□□ -0.38
VBP1P61758 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 AC004870.1-201ENST00000315132 882 ntBASIC12.67□□□□□ -0.38
VBP1P61758 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VBP1P61758 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.67□□□□□ -0.38
VBP1P61758 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
VBP1P61758 MED15P5-201ENST00000423150 992 ntBASIC12.67□□□□□ -0.38
VBP1P61758 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 AL591424.1-201ENST00000442569 1213 ntBASIC12.67□□□□□ -0.38
VBP1P61758 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
VBP1P61758 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.67□□□□□ -0.38
VBP1P61758 AC092337.1-201ENST00000568699 1129 ntBASIC12.67□□□□□ -0.38
VBP1P61758 RN7SL510P-201ENST00000581311 263 ntBASIC12.67□□□□□ -0.38
VBP1P61758 SPDYE22P-201ENST00000582158 798 ntBASIC12.67□□□□□ -0.38
VBP1P61758 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.67□□□□□ -0.38
VBP1P61758 AC138696.2-201ENST00000607376 223 ntBASIC12.67□□□□□ -0.38
VBP1P61758 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.67□□□□□ -0.38
VBP1P61758 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.67□□□□□ -0.38
VBP1P61758 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.67□□□□□ -0.38
VBP1P61758 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.67□□□□□ -0.38
VBP1P61758 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VBP1P61758 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VBP1P61758 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VBP1P61758 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.66□□□□□ -0.38
VBP1P61758 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms