Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.43□□□□□ -0.26
CASP9P55211 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.43□□□□□ -0.26
CASP9P55211 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.43□□□□□ -0.26
CASP9P55211 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.43□□□□□ -0.26
CASP9P55211 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.43□□□□□ -0.26
CASP9P55211 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.43□□□□□ -0.26
CASP9P55211 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.43□□□□□ -0.26
CASP9P55211 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CASP9P55211 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.43□□□□□ -0.26
CASP9P55211 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
CASP9P55211 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.43□□□□□ -0.26
CASP9P55211 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CASP9P55211 AC144522.1-201ENST00000625111 1658 ntBASIC13.43□□□□□ -0.26
CASP9P55211 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CASP9P55211 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.43□□□□□ -0.26
CASP9P55211 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CASP9P55211 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 BOLA2P3-201ENST00000404566 256 ntBASIC13.42□□□□□ -0.26
CASP9P55211 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.42□□□□□ -0.26
CASP9P55211 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.42□□□□□ -0.26
CASP9P55211 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.42□□□□□ -0.26
CASP9P55211 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 AC104989.1-201ENST00000519711 778 ntBASIC13.42□□□□□ -0.26
CASP9P55211 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.42□□□□□ -0.26
CASP9P55211 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.42□□□□□ -0.26
CASP9P55211 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.42□□□□□ -0.26
CASP9P55211 AL162426.1-201ENST00000624141 743 ntBASIC13.42□□□□□ -0.26
CASP9P55211 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.42□□□□□ -0.26
CASP9P55211 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.42□□□□□ -0.26
CASP9P55211 AC004623.1-201ENST00000624592 2127 ntBASIC13.42□□□□□ -0.26
CASP9P55211 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CASP9P55211 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CASP9P55211 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CASP9P55211 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.41□□□□□ -0.26
CASP9P55211 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.41□□□□□ -0.26
CASP9P55211 CSF2RBP1-201ENST00000447905 391 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms