Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.5■□□□□ 0.07
KRT9P35527 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 AL157407.1-201ENST00000435784 904 ntBASIC15.5■□□□□ 0.07
KRT9P35527 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.5■□□□□ 0.07
KRT9P35527 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.5■□□□□ 0.07
KRT9P35527 IGHV3-71-201ENST00000523324 359 ntBASIC15.5■□□□□ 0.07
KRT9P35527 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.5■□□□□ 0.07
KRT9P35527 AC100827.2-201ENST00000563214 1194 ntBASIC15.5■□□□□ 0.07
KRT9P35527 AC009955.4-201ENST00000597192 544 ntBASIC15.5■□□□□ 0.07
KRT9P35527 AC010328.2-201ENST00000597698 1111 ntBASIC15.5■□□□□ 0.07
KRT9P35527 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.5■□□□□ 0.07
KRT9P35527 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
KRT9P35527 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 AC244394.1-201ENST00000435000 1665 ntBASIC15.5■□□□□ 0.07
KRT9P35527 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT9P35527 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT9P35527 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT9P35527 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
KRT9P35527 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.49■□□□□ 0.07
KRT9P35527 RCC2P1-201ENST00000452257 1476 ntBASIC15.49■□□□□ 0.07
KRT9P35527 AC007952.5-201ENST00000572818 1486 ntBASIC15.49■□□□□ 0.07
KRT9P35527 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
KRT9P35527 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 FAM58BP-201ENST00000439056 645 ntBASIC15.49■□□□□ 0.07
KRT9P35527 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 AC119751.2-201ENST00000504529 210 ntBASIC15.49■□□□□ 0.07
KRT9P35527 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 RBM8B-201ENST00000555532 525 ntBASIC15.49■□□□□ 0.07
KRT9P35527 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 AC009884.2-201ENST00000603110 324 ntBASIC15.49■□□□□ 0.07
KRT9P35527 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT9P35527 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
KRT9P35527 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT9P35527 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms