Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 USB1-207ENST00000563149 1751 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 AC092117.1-201ENST00000621230 3250 ntBASIC16.13■□□□□ 0.17
CLCN1P35523 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 AC087164.2-201ENST00000624514 3130 ntBASIC16.12■□□□□ 0.17
CLCN1P35523 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.12■□□□□ 0.17
CLCN1P35523 AL162726.2-201ENST00000438986 1017 ntBASIC16.12■□□□□ 0.17
CLCN1P35523 MTND4LP12-201ENST00000448237 295 ntBASIC16.12■□□□□ 0.17
CLCN1P35523 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 GIMAP3P-201ENST00000495150 836 ntBASIC16.12■□□□□ 0.17
CLCN1P35523 AC022137.2-201ENST00000503482 481 ntBASIC16.12■□□□□ 0.17
CLCN1P35523 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLCN1P35523 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLCN1P35523 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN1P35523 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLCN1P35523 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN1P35523 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.12■□□□□ 0.17
CLCN1P35523 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 AL583810.2-201ENST00000556430 3254 ntBASIC16.11■□□□□ 0.17
CLCN1P35523 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CLCN1P35523 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLCN1P35523 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.11■□□□□ 0.17
CLCN1P35523 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN1P35523 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.11■□□□□ 0.17
CLCN1P35523 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 AC004466.1-201ENST00000599515 1080 ntBASIC16.11■□□□□ 0.17
CLCN1P35523 AL031432.4-201ENST00000641729 2190 ntBASIC16.11■□□□□ 0.17
CLCN1P35523 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.11■□□□□ 0.17
CLCN1P35523 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.11■□□□□ 0.17
CLCN1P35523 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CLCN1P35523 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN1P35523 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.1■□□□□ 0.17
CLCN1P35523 AC008806.1-201ENST00000624962 2443 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms