Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
GABRA3P34903 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 AC007274.1-201ENST00000439805 662 ntBASIC13.16□□□□□ -0.3
GABRA3P34903 DUX4L50-201ENST00000455245 715 ntBASIC13.16□□□□□ -0.3
GABRA3P34903 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.16□□□□□ -0.3
GABRA3P34903 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
GABRA3P34903 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.16□□□□□ -0.3
GABRA3P34903 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.16□□□□□ -0.3
GABRA3P34903 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GABRA3P34903 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GABRA3P34903 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
GABRA3P34903 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GABRA3P34903 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
GABRA3P34903 AC068760.1-201ENST00000493579 1953 ntBASIC13.15□□□□□ -0.3
GABRA3P34903 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.15□□□□□ -0.3
GABRA3P34903 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.15□□□□□ -0.3
GABRA3P34903 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 AC090857.1-201ENST00000527400 390 ntBASIC13.15□□□□□ -0.3
GABRA3P34903 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
GABRA3P34903 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.15□□□□□ -0.3
GABRA3P34903 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.15□□□□□ -0.3
GABRA3P34903 AC100757.4-201ENST00000626934 759 ntBASIC13.15□□□□□ -0.3
GABRA3P34903 AC244452.3-201ENST00000636814 210 ntBASIC13.15□□□□□ -0.3
GABRA3P34903 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.15□□□□□ -0.3
GABRA3P34903 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.15□□□□□ -0.3
GABRA3P34903 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
GABRA3P34903 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GABRA3P34903 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
GABRA3P34903 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.15□□□□□ -0.31
GABRA3P34903 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
GABRA3P34903 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
GABRA3P34903 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
GABRA3P34903 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
GABRA3P34903 TUBBP5-203ENST00000508529 1334 ntBASIC13.14□□□□□ -0.31
GABRA3P34903 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.14□□□□□ -0.31
GABRA3P34903 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GABRA3P34903 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.14□□□□□ -0.31
GABRA3P34903 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
GABRA3P34903 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GABRA3P34903 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GABRA3P34903 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GABRA3P34903 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms