Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC19.22■□□□□ 0.67
CPS1P31327 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC19.22■□□□□ 0.67
CPS1P31327 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CPS1P31327 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 TPM3P7-201ENST00000338274 732 ntBASIC19.22■□□□□ 0.67
CPS1P31327 PMF1-201ENST00000368273 884 ntTSL 2 BASIC19.22■□□□□ 0.67
CPS1P31327 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC19.22■□□□□ 0.67
CPS1P31327 CLK2P1-201ENST00000416636 1294 ntBASIC19.22■□□□□ 0.67
CPS1P31327 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC19.22■□□□□ 0.67
CPS1P31327 AC012066.1-201ENST00000439252 694 ntBASIC19.22■□□□□ 0.67
CPS1P31327 SNORA47-201ENST00000458862 138 ntBASIC19.22■□□□□ 0.67
CPS1P31327 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC19.22■□□□□ 0.67
CPS1P31327 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC19.22■□□□□ 0.67
CPS1P31327 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC19.22■□□□□ 0.67
CPS1P31327 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC19.22■□□□□ 0.67
CPS1P31327 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CPS1P31327 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC19.22■□□□□ 0.67
CPS1P31327 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPS1P31327 TKT-201ENST00000296289 1931 ntTSL 5 BASIC19.22■□□□□ 0.67
CPS1P31327 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.22■□□□□ 0.67
CPS1P31327 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPS1P31327 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPS1P31327 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPS1P31327 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 IMPDH1P5-201ENST00000439688 1540 ntBASIC19.22■□□□□ 0.67
CPS1P31327 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPS1P31327 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 AL513477.1-201ENST00000602865 2407 ntBASIC19.21■□□□□ 0.67
CPS1P31327 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC19.21■□□□□ 0.67
CPS1P31327 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
CPS1P31327 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CPS1P31327 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CPS1P31327 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 RN7SL487P-201ENST00000468140 344 ntBASIC19.21■□□□□ 0.67
CPS1P31327 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 FTH1-205ENST00000529631 507 ntTSL 4 BASIC19.21■□□□□ 0.67
CPS1P31327 BCAR1P1-201ENST00000553953 636 ntBASIC19.21■□□□□ 0.67
CPS1P31327 MIR3940-201ENST00000579148 102 ntBASIC19.21■□□□□ 0.67
CPS1P31327 AC116036.2-201ENST00000607592 462 ntBASIC19.21■□□□□ 0.67
CPS1P31327 KRT18P45-201ENST00000515347 1333 ntBASIC19.21■□□□□ 0.67
CPS1P31327 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC19.21■□□□□ 0.67
CPS1P31327 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
CPS1P31327 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC19.21■□□□□ 0.67
CPS1P31327 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CPS1P31327 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPS1P31327 AC097359.2-201ENST00000604992 2389 ntBASIC19.21■□□□□ 0.67
CPS1P31327 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC19.2■□□□□ 0.66
CPS1P31327 AL391903.1-201ENST00000407513 365 ntBASIC19.2■□□□□ 0.66
CPS1P31327 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
CPS1P31327 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC19.2■□□□□ 0.66
CPS1P31327 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC19.2■□□□□ 0.66
CPS1P31327 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC19.2■□□□□ 0.66
CPS1P31327 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC19.2■□□□□ 0.66
CPS1P31327 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 AC090616.6-202ENST00000583601 1088 ntBASIC19.2■□□□□ 0.66
CPS1P31327 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 GOLGA8EP-201ENST00000530246 1959 ntBASIC19.2■□□□□ 0.66
CPS1P31327 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 AL390755.1-201ENST00000623716 2027 ntBASIC19.2■□□□□ 0.66
CPS1P31327 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC19.2■□□□□ 0.66
CPS1P31327 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
CPS1P31327 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC19.2■□□□□ 0.66
CPS1P31327 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 AKR1C6P-201ENST00000432950 983 ntBASIC19.2■□□□□ 0.66
CPS1P31327 AC005011.1-201ENST00000455206 210 ntBASIC19.2■□□□□ 0.66
CPS1P31327 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms