Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 PKP4P1-201ENST00000426801 2158 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
RAB4AP20338 AGGF1P10-201ENST00000635005 2191 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RAB4AP20338 AC138749.1-201ENST00000567652 2472 ntBASIC10.89□□□□□ -0.67
RAB4AP20338 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.89□□□□□ -0.67
RAB4AP20338 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
RAB4AP20338 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 FAM58CP-201ENST00000435741 640 ntBASIC10.88□□□□□ -0.67
RAB4AP20338 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 AC069335.1-201ENST00000489972 472 ntBASIC10.88□□□□□ -0.67
RAB4AP20338 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.88□□□□□ -0.67
RAB4AP20338 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 RN7SL828P-201ENST00000607615 303 ntBASIC10.88□□□□□ -0.67
RAB4AP20338 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
RAB4AP20338 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC10.88□□□□□ -0.67
RAB4AP20338 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC10.88□□□□□ -0.67
RAB4AP20338 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RAB4AP20338 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 ANKRD20A7P-201ENST00000402318 2414 ntBASIC10.87□□□□□ -0.67
RAB4AP20338 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 MYADML-201ENST00000474610 2147 ntBASIC10.87□□□□□ -0.67
RAB4AP20338 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC10.87□□□□□ -0.67
RAB4AP20338 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RAB4AP20338 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RAB4AP20338 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms