Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 HMGA1P1-201ENST00000415560 1062 ntBASIC12.43□□□□□ -0.42
RAB3BP20337 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB3BP20337 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 CICP12-201ENST00000455801 843 ntBASIC12.43□□□□□ -0.42
RAB3BP20337 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB3BP20337 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 RN7SL48P-201ENST00000579283 293 ntBASIC12.43□□□□□ -0.42
RAB3BP20337 CLUHP6-201ENST00000580789 941 ntBASIC12.43□□□□□ -0.42
RAB3BP20337 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 AC009955.4-201ENST00000597192 544 ntBASIC12.43□□□□□ -0.42
RAB3BP20337 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 AC027601.3-201ENST00000622907 509 ntBASIC12.43□□□□□ -0.42
RAB3BP20337 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB3BP20337 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB3BP20337 SLC7A15P-201ENST00000424028 1363 ntBASIC12.43□□□□□ -0.42
RAB3BP20337 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB3BP20337 AL021155.1-201ENST00000438808 2637 ntBASIC12.42□□□□□ -0.42
RAB3BP20337 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RAB3BP20337 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB3BP20337 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RAB3BP20337 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 AL590824.1-201ENST00000403828 1349 ntBASIC12.42□□□□□ -0.42
RAB3BP20337 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB3BP20337 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB3BP20337 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RAB3BP20337 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB3BP20337 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB3BP20337 AC020917.4-201ENST00000623994 1999 ntBASIC12.42□□□□□ -0.42
RAB3BP20337 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms